Oxford Nanopore long-read sequences (fastq) of Leclercia adecarboxyla... - SRA

SRX20666214: Oxford Nanopore long-read sequences (fastq) of Leclercia adecarboxylata [SAS216F10]
1 OXFORD_NANOPORE (MinION) run: 16,368 spots, 206.1M bases, 171.3Mb downloads

Design: Preparation of libraries was carried out using Oxford Nanopore Technologies (ONT) ligation sequencing kit (SQK-LSK109) and native barcoding expansion kit (EXP-NBD104) according to manufacturers guidelines.

Submitted by: Liverpool School of Tropical Medicine

Study: Complete Genome Sequence of mcr-9 Containing Leclercia adecarboxylata

PRJNA976212 • SRP443053 • All experiments • All runs

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We isolated the gram-negative bacterium Leclercia adecarboxylata after screening the Swab and Send isolate library for bacteria able to tolerate 1 mg/ml of berberine, a plant flavonoid with antimicrobial properties. This strain was isolated from a swab of a horse brush. Analysis of the genome shows it contains one copy of the colistin resistance gene, mcr-9, located on an IncFII(pECLA) plasmid.

Sample:

SAMN35360546 • SRS17962245 • All experiments • All runs

Organism: Leclercia adecarboxylata

Library:

Name: SAS216F10

Instrument: MinION

Strategy: WGS

Source: GENOMIC

Selection: PCR

Layout: SINGLE

Runs: 1 run, 16,368 spots, 206.1M bases, 171.3Mb

Run	# of Spots	# of Bases	Size	Published
SRR24904736	16,368	206.1M	171.3Mb	2023-06-13

ID:: 28095587

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